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Submissions from 2010

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Terminal Deoxynucleotidyl Transferase: The Story of A Misguided DNA Polymerase, Edward A. Motea and Anthony J. Berdis

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Nanostructured Poly(3,4-Ethylenedioxythiophene)–Metalloporphyrin Films: Improved Catalytic Detection of Peroxynitrite, Serban Peteu, Pubudu Peiris, Ermias Gebermichael, and Mekki Bayachou

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Replication of A Universal Nucleobase Provides Unique Insight Into The Role of Entropy During DNA Polymerization and Pyrophosphorolysis, Xuemei Zhang, Edward A. Motea, Irene Lee, and Anthony J. Berdis

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Group Theory and Symmetry. Part III: Representations and Character Tables, David W. Ball

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A Novel Non-Natural Nucleoside That Influences P-Glycoprotein Activity and Mediates Drug Resistance, Kevin T. Eng and Anthony J. Berdis

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Preface, Xue-Long Sun

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Recent Developments in Carbohydrate-Decorated Targeted Drug/Gene Delivery, Hailong Zhang, Yong Ma, and Xue-Long Sun

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Selective Regulation of Aromatase Expression for Drug Discovery, Robert W. Brueggemeier, Bin Su, Michael V. Darby, and Yasuro Sugimoto

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Selective Inhibition of DNA Replicase Assembly by A Non-natural Nucleotide: Exploiting The Structural Diversity of ATP-Binding Sites, Kevin T. Eng, Sarah K. Scouten-Ponticelli, Mark Sutton, and Anthony J. Berdis

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Homozygous Frameshift Mutation in TMCO1 Causes A Syndrome with Craniofacial Dysmorphism, Skeletal Anomalies, and Mental Retardation, Baozhong Xin, Erik G. Puffenberger, Susan Turben, Haiyan Tan, Aimin Zhou, and Heng Wang

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Can PF2OF Exist?, David W. Ball

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Group Theory and Symmetry. Part II: Groups, David W. Ball

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Targeting Base Excision Repair Suggests a New Therapeutic Strategy of Fludarabine for The Treatment of Chronic Lymphocytic Leukemia, A. D. Bulgar, M. Snell, J. R. Donze, E. B. Kirkland, Lan Li, Shuming Yang, Yan Xu, S. L. Gerson, and Lili Liu

Submissions from 2009

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Highly Nitrated Cyclopropanes as New High Energy Materials: DFT Calculations on the Properties of C3H6−n(NO2)n (n=3–6), Aloysus K. Lawong and David W. Ball

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Double Superhelix Model of High Density Lipoprotein, Zhiping Wu, Valentin Gogonea, Xavier Lee, and Mathew A. Wagner

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Group Theory and Symmetry. Part I: Symmetry Elements, David W. Ball

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Synthesis and Cytotoxic Analysis of Some Disodium 3β,6β-Dihydroxysterol Disulfates, Jianguo Cui, Hui Wang, Yi Xin, and Aimin Zhou

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Lead Optimization of COX-2 Inhibitor Nimesulide Analogs to Overcome Aromatase Inhibitor Resistance in Breast Cancer Cells, Bin Su and Shiuan Chen

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Determination of 6-benzylthioinosine in Mouse and Human Plasma by Liquid Chromatography–Tandem Mass Spectrometry, Lan Li, Yan Xu, David N. Wald, and William Tse

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Synthesis and Evaluation of Some Steroidal Oximes as Cytotoxic Agents: Structure/Activity Studies (II), Jianguo Cui, Lei Fan, Yanmin Huang, Yi Xin, and Aimin Zhou

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Color, David W. Ball

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Unusual Phosphorus−Phosphorus Double Bond Contraction Upon Mono- and Di-auration of A Diphosphene, David V. Partyka, Marlena P. Washington, Thomas G. Gray, James B. Updegraff, John F. Turner II, and John D. Protasiewicz

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Mechanisms of DNA Polymerases, Anthony J. Berdis

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A COX-2 Inhibitor Nimesulide Analog Selectively Induces Apoptosis in Her2 Overexpressing Breast Cancer Cells via Cytochrome C Dependent Mechanisms, Bin Chen, Bin Su, and Shiuan Chen

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Auger Spectroscopy, David W. Ball

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Cholesterol Levels and Activity of Membrane Bound Proteins: Characterization by Thermal and Electrochemical Methods, Noufissa Zanati, Michael Ellen Mathews, Perera N. Indika, John J. Moran, Jean A. Boutros, Alan T. Riga, and Mekki Bayachou

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Computational Study of the Structures and Properties of Aminonitroethane Molecules, Kelly Y. Mathews and David W. Ball

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B3LYP Calculations on the Thermodynamic Properties of a Series of Nitroxycubanes Having the Formula C8H8−x(NO3)x (x=1–8), Ryan M. Richard and David W. Ball

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Density functional calculations on the thermodynamic properties of a series of nitrosocubanes having the formula C8H8−x(NO)x (x=1−8), Ryan M. Richard and David W. Ball

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Chemically-Selective Surface Glyco-Functionalization of Liposomes Through Staudinger Ligation, Hailong Zhang, Yong Ma, and Xue-Long Sun

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Reductive Decomposition of A Diazonium Intermediate by Dithiothreitol Affects The Determination of NOS Turnover Rates, Perera N. Indika, Talal Sabbagh, Jean A. Boutros, and Mekki Bayachou

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The Seven Base Units, Part II, David W. Ball

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Inactivation of [Fe-Fe]-Hydrogenase by O2. Thermodynamics and Frontier Molecular Orbitals Analyses, Daniela Dogaru, Stefan Motiu, and Valentin Gogonea

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Isolation and Characterization of Aromatase Inhibitors from Brassaiopsis Glomerulata (Araliaceae), Marcy J. Balunas, Bin Su, Soedarsono Riswan, Harry H.S. Fong, Robert W. Brueggemeier, John M. Pezzuto, and A. Douglas Kinghorn

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The Seven Base Units, Part I, David W. Ball

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Units We May Never (or Rarely) See, David W. Ball

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Alpha Particle Chemistry. On the Formation of Stable Complexes Between He2+ and Other Simple Species: Implications for Atmospheric and Interstellar Chemistry, John P. Coyne and David W. Ball

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Synthesis and Evaluation of Some Steroidal Oximes as Cytotoxic Agents: Structure/Activity Studies (I), Jianguo Cui, Lei Fan, Li Liang Huang, Hong Li Liu, and Aimin Zhou

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Statins Induce Apoptosis in Ovarian Cancer Cells Through Activation of JNK and Enhancement of Bim Expression, Hongli Liu, Shu Ling Liang, Sheetal Kumar, Crystal M. Weyman, Wendy Liu, and Aimin Zhou

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Quantitative Determination of Cannabinoid Receptor Antagonist Surinabant in Human Plasma by LC-UV and LC-ESI-MS/MS Methods, Melissa McCulloch and Yan Xu

Submissions from 2008

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Cooperative Regulation of the Activity of Factor Xa Within Prothrombinase by Discrete Amino Acid Regions From Factor VA Heavy Chain, Melissa A. Barhoover, Tivadar Orban, Michael A. Bukys, and Michael Kalafatis

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Lenses, David W. Ball

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New Potential High Energy Materials: High-Level Calculations on the Properties of Aminonitromethanes, Kelly Y. Mathews and David W. Ball

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Organic Chlorate and Perchlorate Derivatives as High Energy Materials: High-Level Computations on Methyl Chlorate and Methyl Perchlorate, Sara L. Brunswick and David W. Ball

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Prisms, David W. Ball

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Ab Initio Calculations on the Thermodynamic Properties of Azaborospiropentanes, Ryan M. Richard and David W. Ball

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DNA Polymerases as Therapeutic Targets, Anthony J. Berdis

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Mechanism and Dynamics of Translesion DNA Synthesis Catalyzed by The Escherichia Coli Klenow Fragment, Asim Sheriff, Edward A. Motea, Irene Lee, and Anthony J. Berdis

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Role of the Acidic Hirudin-Like COOH-Terminal Amino Acid Region of Factor VA Heavy Chain in the Enhanced Function of Prothrombinase, Jamila Hirbawi, Michael A. Bukys, Melissa A. Barhoover, Evrim Erdogan, and Michael Kalafatis

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Xanthones From The Botanical Dietary Supplement Mangosteen (Garcinia mangostana) with Aromatase Inhibitory Activity, Marcy J. Balunas, Bin Su, Robert W. Brueggemeier, and A. Douglas Kinghorn

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Contribution of Amino Acid Region 334–335 From Factor VA Heavy Chain to the Catalytic Efficiency of Prothrombinase, Melissa A. Barhoover, Tivadar Orban, Daniel O. Beck, Michael A. Bukys, and Michael Kalafatis

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Enthalpies of Formation of Nitrobuckminsterfullerenes: Extrapolation to C60(NO2)60, Ryan M. Richard and David W. Ball

Spectroscopy is Applied Quantum Mechanics. Part 4: Ideal Systems, David W. Ball

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Synthesis and Biological Evaluation of Novel Sulfonanilide Compounds as Antiproliferative Agents for Breast Cancer, Bin Su, Michael V. Darby, and Robert W. Brueggemeier

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Chemoselective Immobilization of Biomolecules Through Aqueous Diels-Alder and PEG Chemistry, Xue-Long Sun, LiuChun Yang, and Elliot L. Chaikof

Spectroscopy is Applied Quantum Mechanics. Part 3: Introduction to Quantum Mechanics, David W. Ball

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The Interaction of Fragment 1 of Prothrombin With the Membrane Surface Is a Prerequisite for Optimum Expression of Factor VA Cofactor Activity Within Prothrombinase, Michael A. Bukys, Tivadar Orban, Paul Y. Kim, Michael E. Nesheim, and Michael Kalafatis

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A Facile and Efficient Synthesis of Some (6E)-Hydroximino-4-En-3-One Steroids, Steroidal Oximes From Cinachyrella spp. Sponges, Jianguo Cui, Liliang Huang, Lei Fan, and Aimin Zhou

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Determination of Endocannabinoid Receptor Antagonist SR141716 (Rimonabant) in Plasma by Liquid Chromatograph Tandem Mass Spectrometry, Melissa McCulloch, Xiang Zhou, Yan Xu, Steve Brunell, and Linda Spear

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4-Hydroxyphenylretinamide (4HPR) Derivatives Regulate Aromatase Activity and Expression in Breast Cancer Cells, Bin Su, Serena M. Mershon, Laura A. Stonerock, Robert W. Curley Jr., and Robert W. Brueggemeier

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Novel Sulfonanilide Analogs Decrease Aromatase Activity in Breast Cancer Cells: Synthesis, Biological Evaluation, and Ligand-Based Pharmacophore Identification, Bin Su, Ran Tian, Michael V. Darby, and Robert W. Brueggemeier

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Ab Initio Calculations on the Thermodynamic Properties of Spiropentane and its Boron-Containing Derivatives, Ryan M. Richard and David W. Ball

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IFN-γ Induces Apoptosis in HL-60 Cells Through Decreased Bcl-2 and Increased Bak Expression, Yan Zhou, Crystal M. Weyman, Hongli Liu, Alexandru Almasan, and Aimin Zhou

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Hexacyclo[7.1.0.01,3.03,5.05,7.07,9]decane, or Pentagramane: High-Level Computational Studies on a Novel Hydrocarbon, David W. Ball

Spectroscopy is Applied Quantum Mechanics. Part 2: The Quantum Revolution, David W. Ball

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Natural Products as Aromatase Inhibitors, Marcy J. Balunas, Bin Su, Robert W. Brueggemeier, and A. Douglas Kinghorn

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A Polarizable Force-Field Model for Quantum-Mechanical-Molecular-Mechanical Hamiltonian Using Expansion of Point Charges Into Orbitals, P. K. Biswas and Valentin Gogonea

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Ab Initio Calculations on the Thermodynamic Properties of Azaspiropentanes, Ryan M. Richard and David W. Ball

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G2, G3, and Complete Basis Set Calculations of the Thermodynamic Properties of cis- and trans-Triazene, Ryan M. Richard and David W. Ball

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G2, G3, and Complete Basis Set Calculations on the Thermodynamic Properties of Triazane, Ryan M. Richard and David W. Ball

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Suppression of Aromatase in Human Breast Cells by A Cyclooxygenase-2 Inhibitor and Its Analog Involves Multiple Mechanisms Independent of Cyclooxygenase-2 Inhibition, Bin Su, Edgar S. Diaz-Cruz, Serena Landini, and Robert W. Brueggemeier

Submissions from 2007

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Spectroscopy is Applied Quantum Mechanics. Part 1: The Need for Quantum Mechanics, David W. Ball

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Enhancing The “A-Rule” of Translesion DNA Synthesis: Promutagenic DNA Synthesis Using Modified Nucleoside Triphosphates, Babho Devadoss, Irene Lee, and Anthony J. Berdis

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G2, G3, and Complete Basis Set Calculations of the Thermodynamic Properties of Aminoborane, Diaminoborane, and Triaminoborane, Ryan M. Richard and David W. Ball

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Identification of an Inactivating Cleavage Site for Alpha-Thrombin on the Heavy Chain of Factor VA, Evrim Erdogan, Michael A. Bukys, Thomas Orfeo, Kenneth G. Mann, and Michael Kalafatis

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Optimization of Non-Natural Nucleotides For Selective Incorporation Opposite Damaged DNA, Diana Vineyard, Xuemei Zhang, Alison Donnelley, Irene Lee, and Anthony J. Berdis

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Optimized Geometries, Vibrational Frequencies, and Thermochemical Properties of Mixed Boron- and Carbon - Containing Three-Membered Rings, Jon Hillegass Jr. and David W. Ball

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Ovarian Cancer G Protein–Coupled Receptor 1, a New Metastasis Suppressor Gene in Prostate Cancer, Lisam Shanjukumar Singh, Michael Berk, Rhonda Oates, Zhenwen Zhao, Haiyan Tan, Ying Jiang, Aimin Zhou, Kashif Kirmani, Rosemary Steinmetz, Daniel Lindner, and Yan Xu

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Light Emitting Diodes, David W. Ball

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Aromatase and COX in Breast Cancer: Enzyme Inhibitors and Beyond, Robert W. Brueggemeier, Bin Su, Yasuro Sugimoto, Edgar S. Diaz-Cruz, and Danyetta D. Davis

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The Use of Non-natural Nucleotides to Probe Template-Independent DNA Synthesis, Anthony J. Berdis and David McCutcheon

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Fire and Flames, David W. Ball

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1,4-Di-9-anthrylbutane, Mustafa Arslan, Erol Asker, John Masnovi, and Ronald J. Baker

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1,3-Bi-9-anthrylpropane, Mustafa Arslan, Erol Asker, John Masnovi, and Ronald J. Baker

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Is A Thymine Dimer Replicated Via A Transient Abasic Site Intermediate? A Comparative Study Using Non-Natural Nucleotides, Babho Devadoss, Irene Lee, and Anthony J. Berdis

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Synthesis and Biological Evaluation of Selective Aromatase Expression Regulators in Breast Cancer Cells, Bin Su, Serena Landini, Danyetta D. Davis, and Robert W. Brueggemeier

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G2, G3, and Complete Basis Set Calculations of the Thermodynamic Properties of Two Isomers of Diazadiboretidine, cyclo-B2N2H4, Amy J. Tricamo, Karen J. Knaus, and David W. Ball

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G2, G3, and Complete Basis Set Calculations of Optimized Geometries, Vibrational Frequencies, and Thermodynamic Properties of Azatriboretidine and Triazaboretidine, Ryan M. Richard and David W. Ball

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Periodic Table, David W. Ball

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The Electromagnetic Spectrum: A History, David W. Ball

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Interaction Energy Decomposition in Protein–Protein Association: A Quantum Mechanical Study of Barnase–Barstar Complex, Abdessamad Ababou, Arjan van der Vaart, Valentin Gogonea, and Kenneth M. Merz Jr.

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Role of 2-5A-Dependent RNase-L in Senescence and Longevity, J. B. Andersen, X. L. Li, C. S. Judge, Aimin Zhou, B. K. Jha, S. Shelby, L. Zhou, Robert H. Silverman, and B. A. Hassel

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Atomic Clocks: An Application of Spectroscopy, David W. Ball

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The Chemical Composition of Honey, David W. Ball

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The Chemical Composition of Maple Syrup, David W. Ball

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Non-Natural Nucleotide Analogs as Probes of DNA Polymerase Activity, Babho Devadoss and Anthony J. Berdis

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Tumour Suppressor Function of RNase L in A Mouse Model, Wendy Liu, Shu Ling Liang, Hongli Liu, Robert Silverman, and Aimin Zhou

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Reactivation Pathway of The Hydrogenase H-cluster: Density Functional Theory Study, Stefan Motiu, Daniela Dogaru, and Valentin Gogonea

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Optimized Geometries, Vibrational Frequencies, and Thermochemical Properties of Mixed Boron- and Nitrogen-Containing Three-Membered Rings, Ryan M. Richard and David W. Ball

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Recent Anti-Influenza Strategies in Multivalent Sialyloligosaccharides and Sialylmimetics Approaches, Xue-Long Sun